WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F43C1.4 Sequence Name  F43C1.4
Length (nt)  1374   Chromosome Location  III: 4230623-4230718
Chromosome . Primary Identifier  III Chromosome Location . Start  4230623
Chromosome Location . End  4230718
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F43C1.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28025 NHR-20 52.0 457 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00047163
WBRNAi00005221
WBRNAi00032172

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F43C1.4 4230623 4230718 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003619 nhr-20 F43C1.4 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:F43C1.4 4230623 4230718 -1
CDS:F43C1.4 4230777 4230934 -1
CDS:F43C1.4 4230983 4231098 -1
CDS:F43C1.4 4231403 4231722 -1
CDS:F43C1.4 4231875 4232032 -1
CDS:F43C1.4 4232138 4232198 -1
CDS:F43C1.4 4232341 4232429 -1
CDS:F43C1.4 4232551 4232727 -1
CDS:F43C1.4 4233004 4233202 -1

1 Sequence

Length
1374

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F43C1.4.1 F43C1.4.1 1578   III: 4230436-4233219