WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y44F5A.1.1 Sequence Name  Y44F5A.1.1
Length (nt)  1341   Chromosome Location  III: 4244858-4247671
Chromosome . Primary Identifier  III Chromosome Location . Start  4244858
Chromosome Location . End  4247671 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y44F5A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012858 Y44F5A.1 Y44F5A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y44F5A.1 Y44F5A.1 1152   III: 4245047-4245349

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y44F5A.1.1 4244858 4247671 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon85065   492   III: 4244858-4245349 Caenorhabditis elegans
Exon85066   312   III: 4245666-4245977 Caenorhabditis elegans
Exon85067   283   III: 4246677-4246959 Caenorhabditis elegans
Exon85068   254   III: 4247418-4247671 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y44F5A.1.1 4244858 4247671 -1

1 Sequence

Length
1341

1 Sequence Ontology Term

Identifier Name Description
transcript