WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R10E4.2b.1 Sequence Name  R10E4.2b.1
Length (nt)  2485   Chromosome Location  III: 4276200-4280217
Chromosome . Primary Identifier  III Chromosome Location . Start  4276200
Chromosome Location . End  4280217 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R10E4.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006331 sup-26 R10E4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R10E4.2b R10E4.2b 1230   III: 4277354-4277380

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R10E4.2b.1 4276200 4280217 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon85197   1181   III: 4276200-4277380 Caenorhabditis elegans
Exon85217   300   III: 4277805-4278104 Caenorhabditis elegans
Exon85233   585   III: 4278208-4278792 Caenorhabditis elegans
Exon85252   192   III: 4278856-4279047 Caenorhabditis elegans
Exon85276   127   III: 4279133-4279259 Caenorhabditis elegans
Exon85289   100   III: 4280118-4280217 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R10E4.2b.1 4276200 4280217 -1

1 Sequence

Length
2485

1 Sequence Ontology Term

Identifier Name Description
transcript