WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R10E4.4.1 Sequence Name  R10E4.4.1
Length (nt)  2418   Chromosome Location  III: 4288264-4291266
Chromosome . Primary Identifier  III Chromosome Location . Start  4288264
Chromosome Location . End  4291266 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R10E4.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003157 mcm-5 R10E4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R10E4.4 R10E4.4 2280   III: 4288384-4288805

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R10E4.4.1 4288264 4291266 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon85305   542   III: 4288264-4288805 Caenorhabditis elegans
Exon85306   271   III: 4288852-4289122 Caenorhabditis elegans
Exon85307   991   III: 4289502-4290492 Caenorhabditis elegans
Exon85308   116   III: 4290538-4290653 Caenorhabditis elegans
Exon85309   313   III: 4290721-4291033 Caenorhabditis elegans
Exon85310   185   III: 4291082-4291266 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R10E4.4.1 4288264 4291266 -1

1 Sequence

Length
2418

1 Sequence Ontology Term

Identifier Name Description
transcript