WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R10E4.5d.1 Sequence Name  R10E4.5d.1
Length (nt)  1824   Chromosome Location  III: 4291597-4294253
Chromosome . Primary Identifier  III Chromosome Location . Start  4291597
Chromosome Location . End  4294253 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R10E4.5d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011201 nth-1 R10E4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R10E4.5d R10E4.5d 897   III: 4291684-4291812

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R10E4.5d.1 4291597 4294253 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon85349   216   III: 4291597-4291812 Caenorhabditis elegans
Exon85355   206   III: 4291858-4292063 Caenorhabditis elegans
Exon85359   199   III: 4292112-4292310 Caenorhabditis elegans
Exon85363   93   III: 4292614-4292706 Caenorhabditis elegans
Exon85366   78   III: 4292754-4292831 Caenorhabditis elegans
Exon85368   1032   III: 4293222-4294253 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R10E4.5d.1 4291597 4294253 -1

1 Sequence

Length
1824

1 Sequence Ontology Term

Identifier Name Description
transcript