WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0285.1c.1 Sequence Name  B0285.1c.1
Length (nt)  4106   Chromosome Location  III: 4332995-4341982
Chromosome . Primary Identifier  III Chromosome Location . Start  4332995
Chromosome Location . End  4341982 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0285.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007135 cdk-12 B0285.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0285.1c B0285.1c 2196   III: 4333396-4333589

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0285.1c.1 4332995 4341982 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon85483   68   III: 4332995-4333062 Caenorhabditis elegans
Exon85487   90   III: 4333135-4333224 Caenorhabditis elegans
Exon85493   196   III: 4333394-4333589 Caenorhabditis elegans
Exon85498   198   III: 4334126-4334323 Caenorhabditis elegans
Exon85504   127   III: 4336227-4336353 Caenorhabditis elegans
Exon85510   114   III: 4336788-4336901 Caenorhabditis elegans
Exon85516   221   III: 4336959-4337179 Caenorhabditis elegans
Exon85522   146   III: 4337533-4337678 Caenorhabditis elegans
Exon85528   290   III: 4337731-4338020 Caenorhabditis elegans
Exon85534   74   III: 4338079-4338152 Caenorhabditis elegans
Exon85540   156   III: 4338414-4338569 Caenorhabditis elegans
Exon85546   195   III: 4338820-4339014 Caenorhabditis elegans
Exon85552   151   III: 4339063-4339213 Caenorhabditis elegans
Exon85558   112   III: 4339508-4339619 Caenorhabditis elegans
Exon85563   1968   III: 4340015-4341982 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0285.1c.1 4332995 4341982 1

1 Sequence

Length
4106

1 Sequence Ontology Term

Identifier Name Description
transcript