WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0285.1a.1 Sequence Name  B0285.1a.1
Length (nt)  2581   Chromosome Location  III: 4333019-4340484
Chromosome . Primary Identifier  III Chromosome Location . Start  4333019
Chromosome Location . End  4340484 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0285.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007135 cdk-12 B0285.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0285.1a B0285.1a 2193   III: 4333396-4333589

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0285.1a.1 4333019 4340484 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon85484   44   III: 4333019-4333062 Caenorhabditis elegans
Exon85485   90   III: 4333135-4333224 Caenorhabditis elegans
Exon85491   196   III: 4333394-4333589 Caenorhabditis elegans
Exon85494   198   III: 4334126-4334323 Caenorhabditis elegans
Exon85500   127   III: 4336227-4336353 Caenorhabditis elegans
Exon85506   114   III: 4336788-4336901 Caenorhabditis elegans
Exon85512   221   III: 4336959-4337179 Caenorhabditis elegans
Exon85518   146   III: 4337533-4337678 Caenorhabditis elegans
Exon85524   290   III: 4337731-4338020 Caenorhabditis elegans
Exon85530   74   III: 4338079-4338152 Caenorhabditis elegans
Exon85536   156   III: 4338414-4338569 Caenorhabditis elegans
Exon85542   195   III: 4338820-4339014 Caenorhabditis elegans
Exon85548   151   III: 4339063-4339213 Caenorhabditis elegans
Exon85554   112   III: 4339508-4339619 Caenorhabditis elegans
Exon85564   467   III: 4340018-4340484 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0285.1a.1 4333019 4340484 1

1 Sequence

Length
2581

1 Sequence Ontology Term

Identifier Name Description
transcript