WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0285.1c.2 Sequence Name  B0285.1c.2
Length (nt)  2458   Chromosome Location  III: 4333387-4340485
Chromosome . Primary Identifier  III Chromosome Location . Start  4333387
Chromosome Location . End  4340485 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0285.1c.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007135 cdk-12 B0285.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0285.1c B0285.1c 2196   III: 4333396-4333589

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0285.1c.2 4333387 4340485 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon85495   203   III: 4333387-4333589 Caenorhabditis elegans
Exon85506   198   III: 4334126-4334323 Caenorhabditis elegans
Exon85512   127   III: 4336227-4336353 Caenorhabditis elegans
Exon85518   114   III: 4336788-4336901 Caenorhabditis elegans
Exon85524   221   III: 4336959-4337179 Caenorhabditis elegans
Exon85530   146   III: 4337533-4337678 Caenorhabditis elegans
Exon85536   290   III: 4337731-4338020 Caenorhabditis elegans
Exon85542   74   III: 4338079-4338152 Caenorhabditis elegans
Exon85548   156   III: 4338414-4338569 Caenorhabditis elegans
Exon85554   195   III: 4338820-4339014 Caenorhabditis elegans
Exon85560   151   III: 4339063-4339213 Caenorhabditis elegans
Exon85566   112   III: 4339508-4339619 Caenorhabditis elegans
Exon85569   471   III: 4340015-4340485 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0285.1c.2 4333387 4340485 1

1 Sequence

Length
2458

1 Sequence Ontology Term

Identifier Name Description
transcript