WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0285.5.3 Sequence Name  B0285.5.3
Length (nt)  1996   Chromosome Location  III: 4345334-4349130
Chromosome . Primary Identifier  III Chromosome Location . Start  4345334
Chromosome Location . End  4349130 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0285.5.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002003 hse-5 B0285.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0285.5 B0285.5 1851   III: 4345342-4345500

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0285.5.3 4345334 4349130 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon85579   167   III: 4345334-4345500 Caenorhabditis elegans
Exon85583   295   III: 4345873-4346167 Caenorhabditis elegans
Exon85586   96   III: 4346397-4346492 Caenorhabditis elegans
Exon85589   159   III: 4346542-4346700 Caenorhabditis elegans
Exon85592   116   III: 4346826-4346941 Caenorhabditis elegans
Exon85595   271   III: 4347070-4347340 Caenorhabditis elegans
Exon85598   219   III: 4347752-4347970 Caenorhabditis elegans
Exon85601   673   III: 4348458-4349130 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0285.5.3 4345334 4349130 1

1 Sequence

Length
1996

1 Sequence Ontology Term

Identifier Name Description
transcript