WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0285.8.1 Sequence Name  B0285.8.1
Length (nt)  1360   Chromosome Location  III: 4365274-4367469
Chromosome . Primary Identifier  III Chromosome Location . Start  4365274
Chromosome Location . End  4367469 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0285.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000511 ckb-1 B0285.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0285.8 B0285.8 1116   III: 4365440-4365454

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0285.8.1 4365274 4367469 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon85636   181   III: 4365274-4365454 Caenorhabditis elegans
Exon85637   128   III: 4365506-4365633 Caenorhabditis elegans
Exon85638   128   III: 4365950-4366077 Caenorhabditis elegans
Exon85639   103   III: 4366263-4366365 Caenorhabditis elegans
Exon85640   111   III: 4366470-4366580 Caenorhabditis elegans
Exon85641   166   III: 4366628-4366793 Caenorhabditis elegans
Exon85642   225   III: 4366863-4367087 Caenorhabditis elegans
Exon85643   318   III: 4367152-4367469 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0285.8.1 4365274 4367469 1

1 Sequence

Length
1360

1 Sequence Ontology Term

Identifier Name Description
transcript