WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0284.4.1 Sequence Name  B0284.4.1
Length (nt)  1263   Chromosome Location  III: 4384787-4387757
Chromosome . Primary Identifier  III Chromosome Location . Start  4384787
Chromosome Location . End  4387757 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0284.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007134 pals-28 B0284.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0284.4 B0284.4 1263   III: 4384787-4384795

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0284.4.1 4384787 4387757 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon85677   9   III: 4384787-4384795 Caenorhabditis elegans
Exon85678   198   III: 4385063-4385260 Caenorhabditis elegans
Exon85679   255   III: 4385922-4386176 Caenorhabditis elegans
Exon85680   381   III: 4386221-4386601 Caenorhabditis elegans
Exon85681   420   III: 4387338-4387757 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0284.4.1 4384787 4387757 1

1 Sequence

Length
1263

1 Sequence Ontology Term

Identifier Name Description
transcript