WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R07E5.6.1 Sequence Name  R07E5.6.1
Length (nt)  1473   Chromosome Location  III: 4398763-4400948
Chromosome . Primary Identifier  III Chromosome Location . Start  4398763
Chromosome Location . End  4400948 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07E5.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011114 R07E5.6 R07E5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07E5.6 R07E5.6 1332   III: 4398854-4398913

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R07E5.6.1 4398763 4400948 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon85695   151   III: 4398763-4398913 Caenorhabditis elegans
Exon85696   216   III: 4399152-4399367 Caenorhabditis elegans
Exon85697   276   III: 4399413-4399688 Caenorhabditis elegans
Exon85698   276   III: 4399818-4400093 Caenorhabditis elegans
Exon85699   255   III: 4400295-4400549 Caenorhabditis elegans
Exon85700   299   III: 4400650-4400948 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R07E5.6.1 4398763 4400948 1

1 Sequence

Length
1473

1 Sequence Ontology Term

Identifier Name Description
transcript