WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R07E5.3.1 Sequence Name  R07E5.3.1
Length (nt)  1358   Chromosome Location  III: 4404786-4406285
Chromosome . Primary Identifier  III Chromosome Location . Start  4404786
Chromosome Location . End  4406285 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07E5.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011111 snfc-5 R07E5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07E5.3 R07E5.3 1146   III: 4404789-4405027

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R07E5.3.1 4404786 4406285 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon85711   242   III: 4404786-4405027 Caenorhabditis elegans
Exon85712   588   III: 4405078-4405665 Caenorhabditis elegans
Exon85714   183   III: 4405710-4405892 Caenorhabditis elegans
Exon85715   345   III: 4405941-4406285 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R07E5.3.1 4404786 4406285 1

1 Sequence

Length
1358

1 Sequence Ontology Term

Identifier Name Description
transcript