WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F56F3.2a Sequence Name  F56F3.2a
Length (nt)  2064   Chromosome Location  III: 4462970-4463119
Chromosome . Primary Identifier  III Chromosome Location . Start  4462970
Chromosome Location . End  4463119
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56F3.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE01015 NDG-4, isoform a 77.7 687 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00048746
WBRNAi00027907
WBRNAi00008882
WBRNAi00064505
WBRNAi00005874
WBRNAi00111802
WBRNAi00068757
WBRNAi00048745
WBRNAi00068756

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F56F3.2a 4462970 4463119 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003577 ndg-4 F56F3.2 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:F56F3.2a 4462970 4463119 -1
CDS:F56F3.2a 4463575 4463717 -1
CDS:F56F3.2a 4464100 4464298 -1
CDS:F56F3.2a 4464530 4464668 -1
CDS:F56F3.2a 4464716 4464819 -1
CDS:F56F3.2a 4464865 4465126 -1
CDS:F56F3.2a 4465374 4465551 -1
CDS:F56F3.2a 4465779 4466072 -1
CDS:F56F3.2a 4466180 4466337 -1
CDS:F56F3.2a 4466530 4466620 -1
CDS:F56F3.2a 4466669 4466773 -1
CDS:F56F3.2a 4467135 4467375 -1

1 Sequence

Length
2064

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F56F3.2a.1 F56F3.2a.1 2197   III: 4462839-4467377