WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25F2.1a.1 Sequence Name  F25F2.1a.1
Length (nt)  1820   Chromosome Location  III: 4508855-4512127
Chromosome . Primary Identifier  III Chromosome Location . Start  4508855
Chromosome Location . End  4512127 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25F2.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009115 F25F2.1 F25F2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25F2.1a F25F2.1a 1746   III: 4508929-4508931

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25F2.1a.1 4508855 4512127 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon85983   77   III: 4508855-4508931 Caenorhabditis elegans
Exon85985   255   III: 4508978-4509232 Caenorhabditis elegans
Exon85987   191   III: 4509632-4509822 Caenorhabditis elegans
Exon85989   108   III: 4510191-4510298 Caenorhabditis elegans
Exon85991   91   III: 4510346-4510436 Caenorhabditis elegans
Exon85993   106   III: 4510489-4510594 Caenorhabditis elegans
Exon85995   113   III: 4510648-4510760 Caenorhabditis elegans
Exon85997   128   III: 4510818-4510945 Caenorhabditis elegans
Exon85999   126   III: 4511180-4511305 Caenorhabditis elegans
Exon86001   228   III: 4511351-4511578 Caenorhabditis elegans
Exon86003   164   III: 4511626-4511789 Caenorhabditis elegans
Exon86006   135   III: 4511848-4511982 Caenorhabditis elegans
Exon86007   98   III: 4512030-4512127 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25F2.1a.1 4508855 4512127 1

1 Sequence

Length
1820

1 Sequence Ontology Term

Identifier Name Description
transcript