WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25F2.1b.1 Sequence Name  F25F2.1b.1
Length (nt)  1853   Chromosome Location  III: 4508866-4512162
Chromosome . Primary Identifier  III Chromosome Location . Start  4508866
Chromosome Location . End  4512162 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25F2.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009115 F25F2.1 F25F2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25F2.1b F25F2.1b 1755   III: 4508929-4508931

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25F2.1b.1 4508866 4512162 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon85984   66   III: 4508866-4508931 Caenorhabditis elegans
Exon85986   255   III: 4508978-4509232 Caenorhabditis elegans
Exon85988   191   III: 4509632-4509822 Caenorhabditis elegans
Exon85990   108   III: 4510191-4510298 Caenorhabditis elegans
Exon85992   91   III: 4510346-4510436 Caenorhabditis elegans
Exon85994   106   III: 4510489-4510594 Caenorhabditis elegans
Exon85996   113   III: 4510648-4510760 Caenorhabditis elegans
Exon85998   128   III: 4510818-4510945 Caenorhabditis elegans
Exon86000   126   III: 4511180-4511305 Caenorhabditis elegans
Exon86002   228   III: 4511351-4511578 Caenorhabditis elegans
Exon86004   164   III: 4511626-4511789 Caenorhabditis elegans
Exon86005   144   III: 4511839-4511982 Caenorhabditis elegans
Exon86008   133   III: 4512030-4512162 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25F2.1b.1 4508866 4512162 1

1 Sequence

Length
1853

1 Sequence Ontology Term

Identifier Name Description
transcript