WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25F2.2.1 Sequence Name  F25F2.2.1
Length (nt)  13422   Chromosome Location  III: 4520357-4536994
Chromosome . Primary Identifier  III Chromosome Location . Start  4520357
Chromosome Location . End  4536994 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25F2.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000396 cdh-4 F25F2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25F2.2 F25F2.2 12987   III: 4520459-4520695

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25F2.2.1 4520357 4536994 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon86048   339   III: 4520357-4520695 Caenorhabditis elegans
Exon86049   264   III: 4521013-4521276 Caenorhabditis elegans
Exon86050   252   III: 4521613-4521864 Caenorhabditis elegans
Exon86051   231   III: 4521922-4522152 Caenorhabditis elegans
Exon86052   777   III: 4522256-4523032 Caenorhabditis elegans
Exon86053   114   III: 4523328-4523441 Caenorhabditis elegans
Exon86054   186   III: 4523829-4524014 Caenorhabditis elegans
Exon86055   105   III: 4524060-4524164 Caenorhabditis elegans
Exon86058   805   III: 4525310-4526114 Caenorhabditis elegans
Exon86059   553   III: 4526161-4526713 Caenorhabditis elegans
Exon86060   912   III: 4526763-4527674 Caenorhabditis elegans
Exon86061   828   III: 4527729-4528556 Caenorhabditis elegans
Exon86062   1876   III: 4528615-4530490 Caenorhabditis elegans
Exon86063   20   III: 4530492-4530511 Caenorhabditis elegans
Exon86064   69   III: 4530513-4530581 Caenorhabditis elegans
Exon86065   382   III: 4530643-4531024 Caenorhabditis elegans
Exon86066   1678   III: 4531072-4532749 Caenorhabditis elegans
Exon86067   2302   III: 4532822-4535123 Caenorhabditis elegans
Exon86068   267   III: 4535171-4535437 Caenorhabditis elegans
Exon86069   840   III: 4535486-4536325 Caenorhabditis elegans
Exon86070   622   III: 4536373-4536994 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25F2.2.1 4520357 4536994 1

1 Sequence

Length
13422

1 Sequence Ontology Term

Identifier Name Description
transcript