WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M88.2.1 Sequence Name  M88.2.1
Length (nt)  812   Chromosome Location  III: 4541420-4542452
Chromosome . Primary Identifier  III Chromosome Location . Start  4541420
Chromosome Location . End  4542452 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M88.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010905 mrps-34 M88.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M88.2 M88.2 687   III: 4541539-4541715

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M88.2.1 4541420 4542452 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon86042   296   III: 4541420-4541715 Caenorhabditis elegans
Exon86043   208   III: 4541796-4542003 Caenorhabditis elegans
Exon86044   131   III: 4542050-4542180 Caenorhabditis elegans
Exon86045   81   III: 4542227-4542307 Caenorhabditis elegans
Exon86046   96   III: 4542357-4542452 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M88.2.1 4541420 4542452 -1

1 Sequence

Length
812

1 Sequence Ontology Term

Identifier Name Description
transcript