WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M88.3.1 Sequence Name  M88.3.1
Length (nt)  1205   Chromosome Location  III: 4543568-4545059
Chromosome . Primary Identifier  III Chromosome Location . Start  4543568
Chromosome Location . End  4545059 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M88.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010906 M88.3 M88.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M88.3 M88.3 1065   III: 4543623-4543695

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M88.3.1 4543568 4545059 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon86050   128   III: 4543568-4543695 Caenorhabditis elegans
Exon86051   204   III: 4543745-4543948 Caenorhabditis elegans
Exon86052   490   III: 4544031-4544520 Caenorhabditis elegans
Exon86053   122   III: 4544564-4544685 Caenorhabditis elegans
Exon86054   104   III: 4544742-4544845 Caenorhabditis elegans
Exon86055   157   III: 4544903-4545059 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M88.3.1 4543568 4545059 -1

1 Sequence

Length
1205

1 Sequence Ontology Term

Identifier Name Description
transcript