WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M88.5e.1 Sequence Name  M88.5e.1
Length (nt)  3301   Chromosome Location  III: 4553617-4560431
Chromosome . Primary Identifier  III Chromosome Location . Start  4553617
Chromosome Location . End  4560431 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M88.5e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010908 imph-1 M88.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M88.5e M88.5e 1944   III: 4556251-4556511

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M88.5e.1 4553617 4560431 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon86071   210   III: 4553617-4553826 Caenorhabditis elegans
Exon86076   172   III: 4554186-4554357 Caenorhabditis elegans
Exon86078   125   III: 4554566-4554690 Caenorhabditis elegans
Exon86088   366   III: 4556146-4556511 Caenorhabditis elegans
Exon86090   162   III: 4556847-4557008 Caenorhabditis elegans
Exon86100   263   III: 4557101-4557363 Caenorhabditis elegans
Exon86106   123   III: 4557415-4557537 Caenorhabditis elegans
Exon86108   175   III: 4557578-4557752 Caenorhabditis elegans
Exon86116   105   III: 4557797-4557901 Caenorhabditis elegans
Exon86122   312   III: 4557980-4558291 Caenorhabditis elegans
Exon86128   304   III: 4558612-4558915 Caenorhabditis elegans
Exon86134   183   III: 4559400-4559582 Caenorhabditis elegans
Exon86136   801   III: 4559631-4560431 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M88.5e.1 4553617 4560431 1

1 Sequence

Length
3301

1 Sequence Ontology Term

Identifier Name Description
transcript