WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F35G12.4b.1 Sequence Name  F35G12.4b.1
Length (nt)  2204   Chromosome Location  III: 4578853-4581697
Chromosome . Primary Identifier  III Chromosome Location . Start  4578853
Chromosome Location . End  4581697 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35G12.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009441 wdr-48 F35G12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F35G12.4b F35G12.4b 2043   III: 4578882-4579067

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F35G12.4b.1 4578853 4581697 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon86225   215   III: 4578853-4579067 Caenorhabditis elegans
Exon86229   127   III: 4579121-4579247 Caenorhabditis elegans
Exon86232   92   III: 4579299-4579390 Caenorhabditis elegans
Exon86235   195   III: 4579438-4579632 Caenorhabditis elegans
Exon86238   207   III: 4579679-4579885 Caenorhabditis elegans
Exon86241   188   III: 4579933-4580120 Caenorhabditis elegans
Exon86244   173   III: 4580165-4580337 Caenorhabditis elegans
Exon86247   107   III: 4580383-4580489 Caenorhabditis elegans
Exon86250   99   III: 4580540-4580638 Caenorhabditis elegans
Exon86253   94   III: 4580692-4580785 Caenorhabditis elegans
Exon86256   148   III: 4580840-4580987 Caenorhabditis elegans
Exon86259   192   III: 4581039-4581230 Caenorhabditis elegans
Exon86262   83   III: 4581280-4581362 Caenorhabditis elegans
Exon86265   284   III: 4581414-4581697 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F35G12.4b.1 4578853 4581697 1

1 Sequence

Length
2204

1 Sequence Ontology Term

Identifier Name Description
transcript