WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F35G12.4c.1 Sequence Name  F35G12.4c.1
Length (nt)  2215   Chromosome Location  III: 4578882-4581686
Chromosome . Primary Identifier  III Chromosome Location . Start  4578882
Chromosome Location . End  4581686 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35G12.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009441 wdr-48 F35G12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F35G12.4c F35G12.4c 2094   III: 4578882-4579067

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F35G12.4c.1 4578882 4581686 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon86227   186   III: 4578882-4579067 Caenorhabditis elegans
Exon86230   127   III: 4579121-4579247 Caenorhabditis elegans
Exon86233   92   III: 4579299-4579390 Caenorhabditis elegans
Exon86236   195   III: 4579438-4579632 Caenorhabditis elegans
Exon86239   207   III: 4579679-4579885 Caenorhabditis elegans
Exon86242   188   III: 4579933-4580120 Caenorhabditis elegans
Exon86245   173   III: 4580165-4580337 Caenorhabditis elegans
Exon86248   107   III: 4580383-4580489 Caenorhabditis elegans
Exon86251   99   III: 4580540-4580638 Caenorhabditis elegans
Exon86254   94   III: 4580692-4580785 Caenorhabditis elegans
Exon86257   148   III: 4580840-4580987 Caenorhabditis elegans
Exon86260   192   III: 4581039-4581230 Caenorhabditis elegans
Exon86263   407   III: 4581280-4581686 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F35G12.4c.1 4578882 4581686 1

1 Sequence

Length
2215

1 Sequence Ontology Term

Identifier Name Description
transcript