WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F35G12.5a.2 Sequence Name  F35G12.5a.2
Length (nt)  1491   Chromosome Location  III: 4584118-4586756
Chromosome . Primary Identifier  III Chromosome Location . Start  4584118
Chromosome Location . End  4586756 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35G12.5a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009442 F35G12.5 F35G12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F35G12.5a F35G12.5a 1140   III: 4584603-4584668

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F35G12.5a.2 4584118 4586756 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon86276   51   III: 4584118-4584168 Caenorhabditis elegans
Exon86279   84   III: 4584585-4584668 Caenorhabditis elegans
Exon86281   114   III: 4584881-4584994 Caenorhabditis elegans
Exon86283   103   III: 4585180-4585282 Caenorhabditis elegans
Exon86287   128   III: 4585330-4585457 Caenorhabditis elegans
Exon86291   125   III: 4585507-4585631 Caenorhabditis elegans
Exon86295   136   III: 4585679-4585814 Caenorhabditis elegans
Exon86299   126   III: 4585865-4585990 Caenorhabditis elegans
Exon86303   123   III: 4586041-4586163 Caenorhabditis elegans
Exon86307   96   III: 4586209-4586304 Caenorhabditis elegans
Exon86313   405   III: 4586352-4586756 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F35G12.5a.2 4584118 4586756 1

1 Sequence

Length
1491

1 Sequence Ontology Term

Identifier Name Description
transcript