WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F35G12.5a.1 Sequence Name  F35G12.5a.1
Length (nt)  1443   Chromosome Location  III: 4584579-4586753
Chromosome . Primary Identifier  III Chromosome Location . Start  4584579
Chromosome Location . End  4586753 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35G12.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009442 F35G12.5 F35G12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F35G12.5a F35G12.5a 1140   III: 4584603-4584668

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F35G12.5a.1 4584579 4586753 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon86277   90   III: 4584579-4584668 Caenorhabditis elegans
Exon86280   114   III: 4584881-4584994 Caenorhabditis elegans
Exon86282   103   III: 4585180-4585282 Caenorhabditis elegans
Exon86286   128   III: 4585330-4585457 Caenorhabditis elegans
Exon86290   125   III: 4585507-4585631 Caenorhabditis elegans
Exon86294   136   III: 4585679-4585814 Caenorhabditis elegans
Exon86298   126   III: 4585865-4585990 Caenorhabditis elegans
Exon86302   123   III: 4586041-4586163 Caenorhabditis elegans
Exon86306   96   III: 4586209-4586304 Caenorhabditis elegans
Exon86311   402   III: 4586352-4586753 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F35G12.5a.1 4584579 4586753 1

1 Sequence

Length
1443

1 Sequence Ontology Term

Identifier Name Description
transcript