WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F10F2.1a.1 Sequence Name  F10F2.1a.1
Length (nt)  7958   Chromosome Location  III: 4596059-4612384
Chromosome . Primary Identifier  III Chromosome Location . Start  4596059
Chromosome Location . End  4612384 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F10F2.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004760 sel-2 F10F2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F10F2.1a F10F2.1a 7524   III: 4596443-4596628

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F10F2.1a.1 4596059 4612384 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

32 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon86345   570   III: 4596059-4596628 Caenorhabditis elegans
Exon86347   112   III: 4596679-4596790 Caenorhabditis elegans
Exon86349   317   III: 4596838-4597154 Caenorhabditis elegans
Exon86351   140   III: 4597204-4597343 Caenorhabditis elegans
Exon86353   255   III: 4597391-4597645 Caenorhabditis elegans
Exon86355   709   III: 4597694-4598402 Caenorhabditis elegans
Exon86357   141   III: 4598454-4598594 Caenorhabditis elegans
Exon86359   257   III: 4598644-4598900 Caenorhabditis elegans
Exon86361   75   III: 4598947-4599021 Caenorhabditis elegans
Exon86363   118   III: 4599078-4599195 Caenorhabditis elegans
Exon86370   137   III: 4603066-4603202 Caenorhabditis elegans
Exon86373   101   III: 4604431-4604531 Caenorhabditis elegans
Exon86375   171   III: 4604648-4604818 Caenorhabditis elegans
Exon86377   152   III: 4604866-4605017 Caenorhabditis elegans
Exon86379   239   III: 4605065-4605303 Caenorhabditis elegans
Exon86381   115   III: 4605824-4605938 Caenorhabditis elegans
Exon86383   108   III: 4605984-4606091 Caenorhabditis elegans
Exon86385   212   III: 4606138-4606349 Caenorhabditis elegans
Exon86387   707   III: 4606395-4607101 Caenorhabditis elegans
Exon86389   120   III: 4607380-4607499 Caenorhabditis elegans
Exon86391   270   III: 4607549-4607818 Caenorhabditis elegans
Exon86393   1095   III: 4607869-4608963 Caenorhabditis elegans
Exon86395   278   III: 4609011-4609288 Caenorhabditis elegans
Exon86397   217   III: 4609337-4609553 Caenorhabditis elegans
Exon86399   350   III: 4609623-4609972 Caenorhabditis elegans
Exon86401   96   III: 4610023-4610118 Caenorhabditis elegans
Exon86403   142   III: 4610254-4610395 Caenorhabditis elegans
Exon86405   86   III: 4610443-4610528 Caenorhabditis elegans
Exon86407   267   III: 4610581-4610847 Caenorhabditis elegans
Exon86410   208   III: 4611342-4611549 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F10F2.1a.1 4596059 4612384 -1

1 Sequence

Length
7958

1 Sequence Ontology Term

Identifier Name Description
transcript