WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F10F2.1b.1 Sequence Name  F10F2.1b.1
Length (nt)  8018   Chromosome Location  III: 4596134-4612351
Chromosome . Primary Identifier  III Chromosome Location . Start  4596134
Chromosome Location . End  4612351 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F10F2.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004760 sel-2 F10F2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F10F2.1b F10F2.1b 7692   III: 4596443-4596628

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F10F2.1b.1 4596134 4612351 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

33 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon86346   495   III: 4596134-4596628 Caenorhabditis elegans
Exon86348   112   III: 4596679-4596790 Caenorhabditis elegans
Exon86350   317   III: 4596838-4597154 Caenorhabditis elegans
Exon86352   140   III: 4597204-4597343 Caenorhabditis elegans
Exon86354   255   III: 4597391-4597645 Caenorhabditis elegans
Exon86356   709   III: 4597694-4598402 Caenorhabditis elegans
Exon86358   141   III: 4598454-4598594 Caenorhabditis elegans
Exon86360   257   III: 4598644-4598900 Caenorhabditis elegans
Exon86362   75   III: 4598947-4599021 Caenorhabditis elegans
Exon86364   118   III: 4599078-4599195 Caenorhabditis elegans
Exon86371   137   III: 4603066-4603202 Caenorhabditis elegans
Exon86374   101   III: 4604431-4604531 Caenorhabditis elegans
Exon86376   171   III: 4604648-4604818 Caenorhabditis elegans
Exon86378   152   III: 4604866-4605017 Caenorhabditis elegans
Exon86380   239   III: 4605065-4605303 Caenorhabditis elegans
Exon86382   115   III: 4605824-4605938 Caenorhabditis elegans
Exon86384   108   III: 4605984-4606091 Caenorhabditis elegans
Exon86386   212   III: 4606138-4606349 Caenorhabditis elegans
Exon86388   707   III: 4606395-4607101 Caenorhabditis elegans
Exon86390   120   III: 4607380-4607499 Caenorhabditis elegans
Exon86392   270   III: 4607549-4607818 Caenorhabditis elegans
Exon86394   1095   III: 4607869-4608963 Caenorhabditis elegans
Exon86396   278   III: 4609011-4609288 Caenorhabditis elegans
Exon86398   217   III: 4609337-4609553 Caenorhabditis elegans
Exon86400   350   III: 4609623-4609972 Caenorhabditis elegans
Exon86402   96   III: 4610023-4610118 Caenorhabditis elegans
Exon86404   142   III: 4610254-4610395 Caenorhabditis elegans
Exon86406   86   III: 4610443-4610528 Caenorhabditis elegans
Exon86408   267   III: 4610581-4610847 Caenorhabditis elegans
Exon86409   168   III: 4611059-4611226 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F10F2.1b.1 4596134 4612351 -1

1 Sequence

Length
8018

1 Sequence Ontology Term

Identifier Name Description
transcript