WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F10F2.2.1 Sequence Name  F10F2.2.1
Length (nt)  4124   Chromosome Location  III: 4618801-4643310
Chromosome . Primary Identifier  III Chromosome Location . Start  4618801
Chromosome Location . End  4643310 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F10F2.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008654 pfas-1 F10F2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F10F2.2 F10F2.2 3975   III: 4618922-4619338

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F10F2.2.1 4618801 4643310 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon86426   538   III: 4618801-4619338 Caenorhabditis elegans
Exon86427   212   III: 4619482-4619693 Caenorhabditis elegans
Exon86428   56   III: 4619739-4619794 Caenorhabditis elegans
Exon86429   139   III: 4619843-4619981 Caenorhabditis elegans
Exon86430   94   III: 4620219-4620312 Caenorhabditis elegans
Exon86431   383   III: 4620366-4620748 Caenorhabditis elegans
Exon86432   124   III: 4620824-4620947 Caenorhabditis elegans
Exon86433   171   III: 4621036-4621206 Caenorhabditis elegans
Exon86434   174   III: 4621397-4621570 Caenorhabditis elegans
Exon86435   126   III: 4621628-4621753 Caenorhabditis elegans
Exon86446   121   III: 4627312-4627432 Caenorhabditis elegans
Exon86447   302   III: 4627476-4627777 Caenorhabditis elegans
Exon86448   113   III: 4628071-4628183 Caenorhabditis elegans
Exon86490   267   III: 4640961-4641227 Caenorhabditis elegans
Exon86491   160   III: 4641278-4641437 Caenorhabditis elegans
Exon86492   104   III: 4641480-4641583 Caenorhabditis elegans
Exon86493   218   III: 4641633-4641850 Caenorhabditis elegans
Exon86494   186   III: 4642059-4642244 Caenorhabditis elegans
Exon86495   80   III: 4642345-4642424 Caenorhabditis elegans
Exon86496   101   III: 4642469-4642569 Caenorhabditis elegans
Exon86497   286   III: 4642615-4642900 Caenorhabditis elegans
Exon86498   169   III: 4643142-4643310 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F10F2.2.1 4618801 4643310 -1

1 Sequence

Length
4124

1 Sequence Ontology Term

Identifier Name Description
transcript