WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T23F11.3a.1 Sequence Name  T23F11.3a.1
Length (nt)  1409   Chromosome Location  III: 4658869-4662694
Chromosome . Primary Identifier  III Chromosome Location . Start  4658869
Chromosome Location . End  4662694 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T23F11.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011955 cdka-1 T23F11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T23F11.3a T23F11.3a 1071   III: 4659574-4659820

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T23F11.3a.1 4658869 4662694 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon86561   45   III: 4658869-4658913 Caenorhabditis elegans
Exon86562   266   III: 4659555-4659820 Caenorhabditis elegans
Exon86564   121   III: 4660244-4660364 Caenorhabditis elegans
Exon86566   162   III: 4660412-4660573 Caenorhabditis elegans
Exon86568   79   III: 4660850-4660928 Caenorhabditis elegans
Exon86571   202   III: 4661008-4661209 Caenorhabditis elegans
Exon86572   125   III: 4661323-4661447 Caenorhabditis elegans
Exon86574   409   III: 4662286-4662694 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T23F11.3a.1 4658869 4662694 1

1 Sequence

Length
1409

1 Sequence Ontology Term

Identifier Name Description
transcript