WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T04A8.1.1 Sequence Name  T04A8.1.1
Length (nt)  975   Chromosome Location  III: 4677766-4679663
Chromosome . Primary Identifier  III Chromosome Location . Start  4677766
Chromosome Location . End  4679663 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T04A8.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005168 srg-10 T04A8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T04A8.1 T04A8.1 975   III: 4677766-4677996

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T04A8.1.1 4677766 4679663 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon86557   231   III: 4677766-4677996 Caenorhabditis elegans
Exon86558   219   III: 4678573-4678791 Caenorhabditis elegans
Exon86559   144   III: 4678846-4678989 Caenorhabditis elegans
Exon86560   183   III: 4679048-4679230 Caenorhabditis elegans
Exon86561   198   III: 4679466-4679663 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T04A8.1.1 4677766 4679663 1

1 Sequence

Length
975

1 Sequence Ontology Term

Identifier Name Description
transcript