WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T04A8.4a.1 Sequence Name  T04A8.4a.1
Length (nt)  778   Chromosome Location  III: 4686097-4687197
Chromosome . Primary Identifier  III Chromosome Location . Start  4686097
Chromosome Location . End  4687197 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T04A8.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044078 tag-243 T04A8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T04A8.4a T04A8.4a 687   III: 4686185-4686299

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T04A8.4a.1 4686097 4687197 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon86572   203   III: 4686097-4686299 Caenorhabditis elegans
Exon86574   266   III: 4686396-4686661 Caenorhabditis elegans
Exon86576   132   III: 4686708-4686839 Caenorhabditis elegans
Exon86578   97   III: 4686969-4687065 Caenorhabditis elegans
Exon86580   80   III: 4687118-4687197 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T04A8.4a.1 4686097 4687197 -1

1 Sequence

Length
778

1 Sequence Ontology Term

Identifier Name Description
transcript