WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T04A8.5 Sequence Name  T04A8.5
Length (nt)  1443   Chromosome Location  III: 4689345-4689433
Chromosome . Primary Identifier  III Chromosome Location . Start  4689345
Chromosome Location . End  4689433
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T04A8.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE01074 PPAT-1 52.1 480 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00052341
WBRNAi00052342
WBRNAi00018115
WBRNAi00005107
WBRNAi00035119
WBRNAi00002700

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T04A8.5 4689345 4689433 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011407 ppat-1 T04A8.5 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:T04A8.5 4689345 4689433 1
CDS:T04A8.5 4690058 4690463 1
CDS:T04A8.5 4690510 4690770 1
CDS:T04A8.5 4691006 4691315 1
CDS:T04A8.5 4691364 4691479 1
CDS:T04A8.5 4691775 4691939 1
CDS:T04A8.5 4691984 4692079 1

1 Sequence

Length
1443

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T04A8.5.1 T04A8.5.1 1600   III: 4689280-4692171