WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T04A8.6.1 Sequence Name  T04A8.6.1
Length (nt)  1073   Chromosome Location  III: 4692098-4693307
Chromosome . Primary Identifier  III Chromosome Location . Start  4692098
Chromosome Location . End  4693307 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T04A8.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011408 nifk-1 T04A8.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T04A8.6 T04A8.6 924   III: 4692229-4692318

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T04A8.6.1 4692098 4693307 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon86591   221   III: 4692098-4692318 Caenorhabditis elegans
Exon86592   516   III: 4692363-4692878 Caenorhabditis elegans
Exon86593   114   III: 4692927-4693040 Caenorhabditis elegans
Exon86594   222   III: 4693086-4693307 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T04A8.6.1 4692098 4693307 -1

1 Sequence

Length
1073

1 Sequence Ontology Term

Identifier Name Description
transcript