WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T04A8.7b.1 Sequence Name  T04A8.7b.1
Length (nt)  2382   Chromosome Location  III: 4695357-4698014
Chromosome . Primary Identifier  III Chromosome Location . Start  4695357
Chromosome Location . End  4698014 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T04A8.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011409 T04A8.7 T04A8.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T04A8.7b T04A8.7b 1821   III: 4695663-4695690

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T04A8.7b.1 4695357 4698014 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon86598   334   III: 4695357-4695690 Caenorhabditis elegans
Exon86601   682   III: 4695754-4696435 Caenorhabditis elegans
Exon86603   116   III: 4696483-4696598 Caenorhabditis elegans
Exon86605   483   III: 4696654-4697136 Caenorhabditis elegans
Exon86607   343   III: 4697200-4697542 Caenorhabditis elegans
Exon86609   424   III: 4697591-4698014 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T04A8.7b.1 4695357 4698014 1

1 Sequence

Length
2382

1 Sequence Ontology Term

Identifier Name Description
transcript