WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T04A8.14.1 Sequence Name  T04A8.14.1
Length (nt)  4865   Chromosome Location  III: 4715293-4720670
Chromosome . Primary Identifier  III Chromosome Location . Start  4715293
Chromosome Location . End  4720670 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T04A8.14.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001259 emb-5 T04A8.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T04A8.14 T04A8.14 4566   III: 4715587-4715777

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T04A8.14.1 4715293 4720670 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon86652   485   III: 4715293-4715777 Caenorhabditis elegans
Exon86653   820   III: 4715830-4716649 Caenorhabditis elegans
Exon86654   174   III: 4716702-4716875 Caenorhabditis elegans
Exon86655   894   III: 4716923-4717816 Caenorhabditis elegans
Exon86656   300   III: 4717865-4718164 Caenorhabditis elegans
Exon86657   354   III: 4718212-4718565 Caenorhabditis elegans
Exon86658   520   III: 4718619-4719138 Caenorhabditis elegans
Exon86659   587   III: 4719183-4719769 Caenorhabditis elegans
Exon86660   342   III: 4719820-4720161 Caenorhabditis elegans
Exon86661   253   III: 4720235-4720487 Caenorhabditis elegans
Exon86662   136   III: 4720535-4720670 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T04A8.14.1 4715293 4720670 -1

1 Sequence

Length
4865

1 Sequence Ontology Term

Identifier Name Description
transcript