WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F17C8.1.1 Sequence Name  F17C8.1.1
Length (nt)  4234   Chromosome Location  III: 4722095-4730919
Chromosome . Primary Identifier  III Chromosome Location . Start  4722095
Chromosome Location . End  4730919 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F17C8.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000068 acy-1 F17C8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F17C8.1 F17C8.1 3762   III: 4722212-4722496

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F17C8.1.1 4722095 4730919 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon86701   402   III: 4722095-4722496 Caenorhabditis elegans
Exon86702   74   III: 4724697-4724770 Caenorhabditis elegans
Exon86703   124   III: 4724880-4725003 Caenorhabditis elegans
Exon86704   303   III: 4725459-4725761 Caenorhabditis elegans
Exon86705   97   III: 4726309-4726405 Caenorhabditis elegans
Exon86706   216   III: 4726453-4726668 Caenorhabditis elegans
Exon86707   356   III: 4726719-4727074 Caenorhabditis elegans
Exon86708   859   III: 4727422-4728280 Caenorhabditis elegans
Exon86709   470   III: 4728530-4728999 Caenorhabditis elegans
Exon86710   186   III: 4729044-4729229 Caenorhabditis elegans
Exon86711   511   III: 4729469-4729979 Caenorhabditis elegans
Exon86712   218   III: 4730076-4730293 Caenorhabditis elegans
Exon86713   418   III: 4730502-4730919 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F17C8.1.1 4722095 4730919 1

1 Sequence

Length
4234

1 Sequence Ontology Term

Identifier Name Description
transcript