WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0393.4.1 Sequence Name  B0393.4.1
Length (nt)  2616   Chromosome Location  III: 4759680-4763609
Chromosome . Primary Identifier  III Chromosome Location . Start  4759680
Chromosome Location . End  4763609 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0393.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007169 B0393.4 B0393.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0393.4 B0393.4 2412   III: 4759803-4760000

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0393.4.1 4759680 4763609 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon86754   321   III: 4759680-4760000 Caenorhabditis elegans
Exon86755   137   III: 4760050-4760186 Caenorhabditis elegans
Exon86756   250   III: 4760677-4760926 Caenorhabditis elegans
Exon86757   493   III: 4761128-4761620 Caenorhabditis elegans
Exon86758   404   III: 4761752-4762155 Caenorhabditis elegans
Exon86759   371   III: 4762353-4762723 Caenorhabditis elegans
Exon86760   324   III: 4762873-4763196 Caenorhabditis elegans
Exon86761   208   III: 4763246-4763453 Caenorhabditis elegans
Exon86763   108   III: 4763502-4763609 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0393.4.1 4759680 4763609 -1

1 Sequence

Length
2616

1 Sequence Ontology Term

Identifier Name Description
transcript