WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0393.9a.1 Sequence Name  B0393.9a.1
Length (nt)  648   Chromosome Location  III: 4778390-4779849
Chromosome . Primary Identifier  III Chromosome Location . Start  4778390
Chromosome Location . End  4779849 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0393.9a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044636 B0393.9 B0393.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0393.9a B0393.9a 567   III: 4778471-4778650

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0393.9a.1 4778390 4779849 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon86791   261   III: 4778390-4778650 Caenorhabditis elegans
Exon86792   114   III: 4778693-4778806 Caenorhabditis elegans
Exon86794   140   III: 4778854-4778993 Caenorhabditis elegans
Exon86796   101   III: 4779673-4779773 Caenorhabditis elegans
Exon86798   32   III: 4779818-4779849 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0393.9a.1 4778390 4779849 -1

1 Sequence

Length
648

1 Sequence Ontology Term

Identifier Name Description
transcript