WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C38D4.8.1 Sequence Name  C38D4.8.1
Length (nt)  1417   Chromosome Location  III: 4812481-4814830
Chromosome . Primary Identifier  III Chromosome Location . Start  4812481
Chromosome Location . End  4814830 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C38D4.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000193 arl-6 C38D4.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C38D4.8 C38D4.8 573   III: 4813309-4813439

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C38D4.8.1 4812481 4814830 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon86919   959   III: 4812481-4813439 Caenorhabditis elegans
Exon86920   76   III: 4813490-4813565 Caenorhabditis elegans
Exon86921   146   III: 4814033-4814178 Caenorhabditis elegans
Exon86922   236   III: 4814595-4814830 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C38D4.8.1 4812481 4814830 -1

1 Sequence

Length
1417

1 Sequence Ontology Term

Identifier Name Description
transcript