WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F26A1.13.1 Sequence Name  F26A1.13.1
Length (nt)  2518   Chromosome Location  III: 4846582-4849907
Chromosome . Primary Identifier  III Chromosome Location . Start  4846582
Chromosome Location . End  4849907 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F26A1.13.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017811 nonu-1 F26A1.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F26A1.13 F26A1.13 1971   III: 4847072-4847226

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F26A1.13.1 4846582 4849907 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon86981   645   III: 4846582-4847226 Caenorhabditis elegans
Exon86982   296   III: 4847275-4847570 Caenorhabditis elegans
Exon86983   367   III: 4847626-4847992 Caenorhabditis elegans
Exon86984   287   III: 4848328-4848614 Caenorhabditis elegans
Exon86985   187   III: 4848664-4848850 Caenorhabditis elegans
Exon86986   194   III: 4848904-4849097 Caenorhabditis elegans
Exon86987   111   III: 4849270-4849380 Caenorhabditis elegans
Exon86988   166   III: 4849429-4849594 Caenorhabditis elegans
Exon86989   265   III: 4849643-4849907 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F26A1.13.1 4846582 4849907 -1

1 Sequence

Length
2518

1 Sequence Ontology Term

Identifier Name Description
transcript