WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F26F4.5.1 Sequence Name  F26F4.5.1
Length (nt)  1669   Chromosome Location  III: 4887927-4890951
Chromosome . Primary Identifier  III Chromosome Location . Start  4887927
Chromosome Location . End  4890951 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F26F4.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017827 F26F4.5 F26F4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F26F4.5 F26F4.5 1398   III: 4888197-4888539

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F26F4.5.1 4887927 4890951 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon87093   613   III: 4887927-4888539 Caenorhabditis elegans
Exon87094   212   III: 4888624-4888835 Caenorhabditis elegans
Exon87096   376   III: 4889268-4889643 Caenorhabditis elegans
Exon87098   153   III: 4889756-4889908 Caenorhabditis elegans
Exon87100   184   III: 4890583-4890766 Caenorhabditis elegans
Exon87102   131   III: 4890821-4890951 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F26F4.5.1 4887927 4890951 -1

1 Sequence

Length
1669

1 Sequence Ontology Term

Identifier Name Description
transcript