WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F26F4.4.2 Sequence Name  F26F4.4.2
Length (nt)  1593   Chromosome Location  III: 4900718-4903170
Chromosome . Primary Identifier  III Chromosome Location . Start  4900718
Chromosome Location . End  4903170 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F26F4.4.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017826 tag-340 F26F4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F26F4.4 F26F4.4 1344   III: 4900758-4900825

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F26F4.4.2 4900718 4903170 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon87126   108   III: 4900718-4900825 Caenorhabditis elegans
Exon87129   133   III: 4900872-4901004 Caenorhabditis elegans
Exon87131   138   III: 4901050-4901187 Caenorhabditis elegans
Exon87133   127   III: 4901232-4901358 Caenorhabditis elegans
Exon87135   67   III: 4901405-4901471 Caenorhabditis elegans
Exon87137   403   III: 4902055-4902457 Caenorhabditis elegans
Exon87139   301   III: 4902505-4902805 Caenorhabditis elegans
Exon87141   316   III: 4902855-4903170 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F26F4.4.2 4900718 4903170 1

1 Sequence

Length
1593

1 Sequence Ontology Term

Identifier Name Description
transcript