WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F26F4.3.1 Sequence Name  F26F4.3.1
Length (nt)  1272   Chromosome Location  III: 4907196-4908993
Chromosome . Primary Identifier  III Chromosome Location . Start  4907196
Chromosome Location . End  4908993 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F26F4.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004400 rom-1 F26F4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F26F4.3 F26F4.3 1071   III: 4907226-4907426

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F26F4.3.1 4907196 4908993 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon87153   231   III: 4907196-4907426 Caenorhabditis elegans
Exon87154   162   III: 4907802-4907963 Caenorhabditis elegans
Exon87155   170   III: 4908010-4908179 Caenorhabditis elegans
Exon87156   214   III: 4908235-4908448 Caenorhabditis elegans
Exon87157   495   III: 4908499-4908993 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F26F4.3.1 4907196 4908993 1

1 Sequence

Length
1272

1 Sequence Ontology Term

Identifier Name Description
transcript