WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F26F4.10a.2 Sequence Name  F26F4.10a.2
Length (nt)  2333   Chromosome Location  III: 4914088-4917129
Chromosome . Primary Identifier  III Chromosome Location . Start  4914088
Chromosome Location . End  4917129 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F26F4.10a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004679 rars-1 F26F4.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F26F4.10a F26F4.10a 2142   III: 4914257-4914363

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F26F4.10a.2 4914088 4917129 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon87186   276   III: 4914088-4914363 Caenorhabditis elegans
Exon87192   331   III: 4914421-4914751 Caenorhabditis elegans
Exon87195   259   III: 4914797-4915055 Caenorhabditis elegans
Exon87199   232   III: 4915107-4915338 Caenorhabditis elegans
Exon87203   105   III: 4915386-4915490 Caenorhabditis elegans
Exon87207   259   III: 4915693-4915951 Caenorhabditis elegans
Exon87211   324   III: 4915998-4916321 Caenorhabditis elegans
Exon87215   208   III: 4916368-4916575 Caenorhabditis elegans
Exon87220   266   III: 4916745-4917010 Caenorhabditis elegans
Exon87225   73   III: 4917057-4917129 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F26F4.10a.2 4914088 4917129 -1

1 Sequence

Length
2333

1 Sequence Ontology Term

Identifier Name Description
transcript