WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F26F4.10a.1 Sequence Name  F26F4.10a.1
Length (nt)  2313   Chromosome Location  III: 4914096-4917117
Chromosome . Primary Identifier  III Chromosome Location . Start  4914096
Chromosome Location . End  4917117 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F26F4.10a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004679 rars-1 F26F4.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F26F4.10a F26F4.10a 2142   III: 4914257-4914363

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F26F4.10a.1 4914096 4917117 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon87187   268   III: 4914096-4914363 Caenorhabditis elegans
Exon87191   331   III: 4914421-4914751 Caenorhabditis elegans
Exon87194   259   III: 4914797-4915055 Caenorhabditis elegans
Exon87198   232   III: 4915107-4915338 Caenorhabditis elegans
Exon87202   105   III: 4915386-4915490 Caenorhabditis elegans
Exon87206   259   III: 4915693-4915951 Caenorhabditis elegans
Exon87210   324   III: 4915998-4916321 Caenorhabditis elegans
Exon87214   208   III: 4916368-4916575 Caenorhabditis elegans
Exon87219   266   III: 4916745-4917010 Caenorhabditis elegans
Exon87223   61   III: 4917057-4917117 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F26F4.10a.1 4914096 4917117 -1

1 Sequence

Length
2313

1 Sequence Ontology Term

Identifier Name Description
transcript