WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F26F4.10b.1 Sequence Name  F26F4.10b.1
Length (nt)  2269   Chromosome Location  III: 4914134-4917107
Chromosome . Primary Identifier  III Chromosome Location . Start  4914134
Chromosome Location . End  4917107 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F26F4.10b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004679 rars-1 F26F4.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F26F4.10b F26F4.10b 2079   III: 4914324-4914363

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F26F4.10b.1 4914134 4917107 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon87189   230   III: 4914134-4914363 Caenorhabditis elegans
Exon87190   335   III: 4914417-4914751 Caenorhabditis elegans
Exon87196   259   III: 4914797-4915055 Caenorhabditis elegans
Exon87200   232   III: 4915107-4915338 Caenorhabditis elegans
Exon87204   105   III: 4915386-4915490 Caenorhabditis elegans
Exon87208   259   III: 4915693-4915951 Caenorhabditis elegans
Exon87212   324   III: 4915998-4916321 Caenorhabditis elegans
Exon87216   208   III: 4916368-4916575 Caenorhabditis elegans
Exon87221   266   III: 4916745-4917010 Caenorhabditis elegans
Exon87222   51   III: 4917057-4917107 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F26F4.10b.1 4914134 4917107 -1

1 Sequence

Length
2269

1 Sequence Ontology Term

Identifier Name Description
transcript