WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27F2.7.1 Sequence Name  C27F2.7.1
Length (nt)  1370   Chromosome Location  III: 4980521-4984494
Chromosome . Primary Identifier  III Chromosome Location . Start  4980521
Chromosome Location . End  4984494 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27F2.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016169 C27F2.7 C27F2.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27F2.7 C27F2.7 1227   III: 4980644-4980847

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C27F2.7.1 4980521 4984494 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon87507   327   III: 4980521-4980847 Caenorhabditis elegans
Exon87508   127   III: 4980899-4981025 Caenorhabditis elegans
Exon87509   227   III: 4981390-4981616 Caenorhabditis elegans
Exon87510   153   III: 4981662-4981814 Caenorhabditis elegans
Exon87511   86   III: 4982031-4982116 Caenorhabditis elegans
Exon87512   132   III: 4982170-4982301 Caenorhabditis elegans
Exon87513   74   III: 4982353-4982426 Caenorhabditis elegans
Exon87514   99   III: 4982499-4982597 Caenorhabditis elegans
Exon87515   79   III: 4982974-4983052 Caenorhabditis elegans
Exon87516   66   III: 4984429-4984494 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C27F2.7.1 4980521 4984494 -1

1 Sequence

Length
1370

1 Sequence Ontology Term

Identifier Name Description
transcript