WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27F2.10.1 Sequence Name  C27F2.10.1
Length (nt)  1401   Chromosome Location  III: 4985019-4986898
Chromosome . Primary Identifier  III Chromosome Location . Start  4985019
Chromosome Location . End  4986898 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27F2.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016171 C27F2.10 C27F2.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27F2.10 C27F2.10 1242   III: 4985153-4985248

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C27F2.10.1 4985019 4986898 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon87517   230   III: 4985019-4985248 Caenorhabditis elegans
Exon87518   124   III: 4985364-4985487 Caenorhabditis elegans
Exon87519   124   III: 4985539-4985662 Caenorhabditis elegans
Exon87520   177   III: 4985708-4985884 Caenorhabditis elegans
Exon87521   145   III: 4985936-4986080 Caenorhabditis elegans
Exon87522   294   III: 4986130-4986423 Caenorhabditis elegans
Exon87523   144   III: 4986501-4986644 Caenorhabditis elegans
Exon87524   91   III: 4986695-4986785 Caenorhabditis elegans
Exon87525   72   III: 4986827-4986898 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C27F2.10.1 4985019 4986898 -1

1 Sequence

Length
1401

1 Sequence Ontology Term

Identifier Name Description
transcript