WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27F2.1.1 Sequence Name  C27F2.1.1
Length (nt)  2121   Chromosome Location  III: 4987209-4991450
Chromosome . Primary Identifier  III Chromosome Location . Start  4987209
Chromosome Location . End  4991450 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27F2.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016165 wdr-60 C27F2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27F2.1 C27F2.1 2007   III: 4987268-4987302

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C27F2.1.1 4987209 4991450 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon87526   94   III: 4987209-4987302 Caenorhabditis elegans
Exon87527   241   III: 4987344-4987584 Caenorhabditis elegans
Exon87528   123   III: 4987653-4987775 Caenorhabditis elegans
Exon87529   97   III: 4988076-4988172 Caenorhabditis elegans
Exon87530   272   III: 4988357-4988628 Caenorhabditis elegans
Exon87531   121   III: 4988672-4988792 Caenorhabditis elegans
Exon87532   142   III: 4989140-4989281 Caenorhabditis elegans
Exon87533   73   III: 4989420-4989492 Caenorhabditis elegans
Exon87534   73   III: 4989546-4989618 Caenorhabditis elegans
Exon87535   109   III: 4989692-4989800 Caenorhabditis elegans
Exon87536   129   III: 4990151-4990279 Caenorhabditis elegans
Exon87537   146   III: 4990588-4990733 Caenorhabditis elegans
Exon87538   59   III: 4990780-4990838 Caenorhabditis elegans
Exon87539   116   III: 4990916-4991031 Caenorhabditis elegans
Exon87540   97   III: 4991075-4991171 Caenorhabditis elegans
Exon87541   229   III: 4991222-4991450 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C27F2.1.1 4987209 4991450 1

1 Sequence

Length
2121

1 Sequence Ontology Term

Identifier Name Description
transcript