WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R144.10.1 Sequence Name  R144.10.1
Length (nt)  798   Chromosome Location  III: 5001297-5002331
Chromosome . Primary Identifier  III Chromosome Location . Start  5001297
Chromosome Location . End  5002331 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R144.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020098 R144.10 R144.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R144.10 R144.10 603   III: 5001471-5001785

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R144.10.1 5001297 5002331 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon87565   489   III: 5001297-5001785 Caenorhabditis elegans
Exon87566   48   III: 5001837-5001884 Caenorhabditis elegans
Exon87567   69   III: 5001928-5001996 Caenorhabditis elegans
Exon87568   57   III: 5002042-5002098 Caenorhabditis elegans
Exon87569   82   III: 5002150-5002231 Caenorhabditis elegans
Exon87570   53   III: 5002279-5002331 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R144.10.1 5001297 5002331 -1

1 Sequence

Length
798

1 Sequence Ontology Term

Identifier Name Description
transcript