WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R144.9.1 Sequence Name  R144.9.1
Length (nt)  640   Chromosome Location  III: 5021224-5021960
Chromosome . Primary Identifier  III Chromosome Location . Start  5021224
Chromosome Location . End  5021960 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R144.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007015 mdt-11 R144.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R144.9 R144.9 567   III: 5021226-5021363

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R144.9.1 5021224 5021960 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon87634   140   III: 5021224-5021363 Caenorhabditis elegans
Exon87635   115   III: 5021413-5021527 Caenorhabditis elegans
Exon87636   385   III: 5021576-5021960 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R144.9.1 5021224 5021960 1

1 Sequence

Length
640

1 Sequence Ontology Term

Identifier Name Description
transcript